Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | E5E93_05020 | Not Available | Negative | 1031119 - 1031766 | 23534.0 |
| lactoylglutathione lyase | E5E93_05025 | Not Available | Negative | 1031869 - 1032276 | 14920.7 |
| n-ethylmaleimide reductase | E5E93_05030 | Not Available | Negative | 1032357 - 1033454 | 39460.6 |
| tetr/acrr family transcriptional regulator | E5E93_05035 | Not Available | Negative | 1033491 - 1034090 | 22205.6 |
| duf1289 domain-containing protein | E5E93_05040 | Not Available | Positive | 1034193 - 1034432 | 9359.15 |
| aldo/keto reductase family oxidoreductase | E5E93_05045 | Not Available | Positive | 1034481 - 1035377 | 33688.7 |
| superoxide dismutase | E5E93_05050 | Not Available | Positive | 1035458 - 1035979 | 17682.0 |
| fusc family protein | E5E93_05055 | Not Available | Negative | 1035980 - 1037992 | 75252.0 |
| hlyd family secretion protein | E5E93_05060 | Not Available | Negative | 1037992 - 1038849 | 31540.6 |
| duf1656 domain-containing protein | E5E93_05065 | Not Available | Negative | 1038852 - 1039088 | 8891.33 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





