Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein x | E5E93_11280 | Not Available | Negative | 2328989 - 2329192 | 7592.02 |
| Head completion/stabilization protein | E5E93_11285 | Not Available | Negative | 2329192 - 2329656 | 17670.8 |
| Terminase endonuclease subunit | E5E93_11290 | Not Available | Negative | 2329752 - 2330402 | 23777.6 |
| Major capsid protein, p2 family | E5E93_11295 | Not Available | Negative | 2330406 - 2331461 | 39137.4 |
| Gpo family capsid scaffolding protein | E5E93_11300 | Not Available | Negative | 2331478 - 2332313 | 30497.4 |
| Terminase atpase subunit | E5E93_11305 | Not Available | Positive | 2332456 - 2334221 | 64028.2 |
| Portal protein | E5E93_11310 | Not Available | Positive | 2334221 - 2335249 | 38706.6 |
| Hypothetical protein | E5E93_11315 | Not Available | Negative | 2335588 - 2336022 | 16498.2 |
| hypothetical protein | E5E93_11320 | Not Available | Negative | 2336024 - 2336839 | 30974.2 |
| Dna damage inducible protein | E5E93_11325 | Not Available | Negative | 2337164 - 2337469 | 11934.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





