Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | E5E93_04530 | Not Available | Negative | 931829 - 932590 | 27165.7 |
| dienelactone hydrolase family protein | E5E93_04535 | Not Available | Positive | 932852 - 933664 | 29341.6 |
| type vi secretion system tube protein hcp | E5E93_04540 | Not Available | Positive | 934057 - 935205 | 42607.1 |
| marr family transcriptional regulator | E5E93_04545 | Not Available | Positive | 935195 - 935440 | 9314.24 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | E5E93_04550 | Not Available | Negative | 935725 - 937986 | 84725.2 |
| hth-type transcriptional regulator metr | E5E93_04555 | Not Available | Positive | 938222 - 939175 | 35637.0 |
| biotin transporter | E5E93_04560 | Not Available | Negative | 939063 - 939962 | 33729.0 |
| sugar/pyridoxal phosphate phosphatase yigl | E5E93_04565 | Not Available | Negative | 940038 - 940838 | 29709.4 |
| lysophospholipase l2 | E5E93_04570 | Not Available | Negative | 940846 - 941868 | 38980.4 |
| homoserine/homoserine lactone efflux protein | E5E93_04575 | Not Available | Positive | 941979 - 942599 | 22428.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





