Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-flavin reductase | E5E93_04475 | Not Available | Negative | 921792 - 922493 | 26243.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | E5E93_04480 | Not Available | Negative | 922539 - 924032 | 55534.8 |
| transcription/translation regulatory transformer protein rfah | E5E93_04485 | Not Available | Positive | 924199 - 924687 | 18341.3 |
| 3'-5' ssdna/rna exonuclease tatd | E5E93_04490 | Not Available | Negative | 924684 - 925466 | 29028.6 |
| sec-independent protein translocase subunit tatb | E5E93_04500 | Not Available | Negative | 926288 - 926803 | 18421.8 |
| sec-independent protein translocase subunit tata | E5E93_04505 | Not Available | Negative | 926807 - 927076 | 9664.5 |
| ubiquinone biosynthesis regulatory protein kinase ubib | E5E93_04510 | Not Available | Negative | 927155 - 928795 | 63206.4 |
| ubiquinone biosynthesis protein ubij | E5E93_04515 | Not Available | Negative | 928792 - 929397 | 22123.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | E5E93_04520 | Not Available | Negative | 929411 - 930166 | 28074.8 |
| dna recombination protein rmuc | E5E93_04525 | Not Available | Negative | 930261 - 931688 | 54767.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





