Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | E5E93_04420 | Not Available | Negative | 907258 - 907758 | 17519.2 |
| fimbrial protein | E5E93_04425 | Not Available | Negative | 907769 - 908527 | 27908.6 |
| fimbrial biogenesis outer membrane usher protein | E5E93_04430 | Not Available | Negative | 908550 - 911189 | 96919.2 |
| type 1 fimbrial protein | E5E93_04435 | Not Available | Negative | 911271 - 911834 | 19661.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | E5E93_04445 | Not Available | Negative | 914056 - 914601 | 21227.4 |
| trk system potassium transporter trkh | E5E93_04450 | Not Available | Negative | 914613 - 916064 | 52962.9 |
| impact family protein | E5E93_04455 | Not Available | Negative | 916103 - 916717 | 21708.1 |
| xaa-pro dipeptidase | E5E93_04460 | Not Available | Negative | 916717 - 918048 | 50088.8 |
| fatty acid oxidation complex subunit alpha fadb | E5E93_04465 | Not Available | Positive | 918238 - 920427 | 79551.4 |
| acetyl-coa c-acyltransferase fada | E5E93_04470 | Not Available | Positive | 920437 - 921600 | 40847.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





