Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | E5E93_04365 | Not Available | Positive | 897883 - 899889 | 74410.1 |
| yfcl family protein | E5E93_04370 | Not Available | Negative | 900010 - 900288 | 10000.6 |
| elongation factor p hydroxylase | E5E93_04375 | Not Available | Negative | 900322 - 900870 | 21130.6 |
| hypothetical protein | E5E93_04380 | Not Available | Negative | 900870 - 901679 | 28645.2 |
| penicillin-insensitive murein endopeptidase | E5E93_04385 | Not Available | Negative | 901679 - 902503 | 30100.4 |
| chorismate synthase | E5E93_04390 | Not Available | Negative | 902507 - 903592 | 39138.9 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | E5E93_04395 | Not Available | Negative | 903627 - 904559 | 35030.7 |
| endonuclease smrb | E5E93_04400 | Not Available | Positive | 904725 - 905276 | 21000.5 |
| fimbrial protein | E5E93_04410 | Not Available | Negative | 906273 - 906794 | 18190.7 |
| fimbrial protein | E5E93_04415 | Not Available | Negative | 906791 - 907219 | 15587.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





