Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slc13 family permease | E5E93_04205 | Not Available | Negative | 865543 - 867375 | 65876.0 |
| hexitol phosphatase hpxa | E5E93_04210 | Not Available | Negative | 867462 - 868112 | 23035.9 |
| yfbu family protein | E5E93_04215 | Not Available | Negative | 868123 - 868617 | 19537.4 |
| duf412 domain-containing protein | E5E93_04220 | Not Available | Negative | 868700 - 869155 | 17244.2 |
| acetate kinase | E5E93_04225 | Not Available | Positive | 869495 - 870697 | 43293.0 |
| phosphate acetyltransferase | E5E93_04230 | Not Available | Positive | 870772 - 872916 | 77162.5 |
| putative basic amino acid antiporter yfcc | E5E93_04235 | Not Available | Positive | 873106 - 874626 | 54800.0 |
| nudix hydrolase yfcd | E5E93_04240 | Not Available | Negative | 874659 - 875201 | 20376.9 |
| phosphodiesterase | E5E93_04245 | Not Available | Negative | 875259 - 875810 | 19992.1 |
| glutathione transferase | E5E93_04250 | Not Available | Negative | 875866 - 876510 | 24298.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





