Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein | E5E93_11230 | Not Available | Negative | 2324609 - 2325517 | 32511.6 |
| Phage baseplate assembly protein | E5E93_11235 | Not Available | Negative | 2325504 - 2325863 | 13005.5 |
| Putative phage baseplate assembly protein | E5E93_11240 | Not Available | Negative | 2325860 - 2326438 | 20874.7 |
| Virion morphogenesis protein | E5E93_11245 | Not Available | Negative | 2326507 - 2326953 | 17272.9 |
| Putative phage tail protein | E5E93_11250 | Not Available | Negative | 2326946 - 2327377 | 16130.1 |
| P2 lysc-like protein | E5E93_11255 | Not Available | Negative | 2327340 - 2327543 | 7298.64 |
| Lysb familyglysis regulatory protein | E5E93_11260 | Not Available | Negative | 2327473 - 2327901 | 15858.8 |
| Hypothetical protein | E5E93_11265 | Not Available | Negative | 2327898 - 2328275 | 14049.1 |
| Lysozyme | E5E93_11270 | Not Available | Negative | 2328277 - 2328750 | 17255.7 |
| Holin | E5E93_11275 | Not Available | Negative | 2328770 - 2328985 | 8113.98 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





