Escherichia coli str. B7S79

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. B7S79 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the normal body temperature of warm-blooded hosts, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli str. B7S79 has the capability to grow in both aerobic and anaerobic environments, allowing it to exploit a variety of niches within the gastrointestinal tract of its hosts. The ability to inhabit a host-associated environment suggests that E. coli str. B7S79 may play a role in the complex microbial ecosystems found within the intestines, potentially contributing to nutrient metabolism and the maintenance of gut homeostasis. Its Gram-negative cell wall structure may also confer certain advantages, such as resistance to some antimicrobial agents, which could influence its interactions with both the host immune system and other microbial inhabitants. Understanding the specific roles and interactions of E. coli str. B7S79 in its ecological niche could provide valuable insights into microbial dynamics and host-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainB7S79

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. B7S79
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain B7S79 NODE_268_length_203_cov_711.69,

Gene Summary

Adenine Count

1291467 bp

Thymine Count

1288268 bp

Guanine Count

1321458 bp

Cytosine Count

1328609 bp

Genome Length

5229802 bp

Protein-coding Genes

4841 genes

Non-Coding Genes

312 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2176218 - 2176297Not Available
IntegraseE0E06_10355Not AvailableNegative2176404 - 217740537806.8
Hypothetical proteinE0E06_10360Not AvailableNegative2177411 - 217775812856.5
Flagella biosynthesis regulator flkE0E06_10365Not AvailableNegative2177788 - 217843824294.0
Transcriptional regulatorE0E06_10370Not AvailableNegative2178454 - 217885814804.4
hypothetical proteinE0E06_10375Not AvailableNegative2178948 - 21790854841.89
Dna-binding proteinE0E06_10380Not AvailablePositive2179157 - 21793607371.28
Hypothetical proteinE0E06_10385Not AvailablePositive2179382 - 217973213240.5
Hypothetical proteinE0E06_10390Not AvailablePositive2179743 - 218002110390.3
Dna modification methyltransferaseE0E06_10395Not AvailablePositive2180033 - 21802759001.64

Displaying genes 61 – 70 of 5153 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total