Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | B7S79 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1291467 bp
Thymine Count
1288268 bp
Guanine Count
1321458 bp
Cytosine Count
1328609 bp
Genome Length
5229802 bp
Protein-coding Genes
4841 genes
Non-Coding Genes
312 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | E0E06_21570 | Not Available | Positive | 4398746 - 4399564 | 29380.4 |
| duf1488 domain-containing protein | E0E06_21575 | Not Available | Positive | 4399561 - 4399818 | 10051.5 |
| gamma carbonic anhydrase family protein | E0E06_21580 | Not Available | Negative | 4399794 - 4400348 | 20276.3 |
| glutamate decarboxylase | E0E06_21585 | Not Available | Negative | 4400752 - 4401431 | 25958.1 |
| cytochrome c peroxidase | E0E06_21590 | Not Available | Negative | 4401642 - 4403039 | 51542.3 |
| alpha,alpha-trehalase tref | E0E06_21595 | Not Available | Positive | 4403444 - 4405093 | 63700.1 |
| response regulator transcription factor | E0E06_21600 | Not Available | Negative | 4405144 - 4405746 | 22605.6 |
| lysr family transcriptional regulator | E0E06_21605 | Not Available | Positive | 4406266 - 4407165 | 33341.6 |
| inner membrane protein yhjd | E0E06_21610 | Not Available | Positive | 4407214 - 4408227 | 37902.6 |
| mfs transporter | E0E06_21615 | Not Available | Positive | 4408620 - 4409942 | 47226.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





