Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | B7S79 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1291467 bp
Thymine Count
1288268 bp
Guanine Count
1321458 bp
Cytosine Count
1328609 bp
Genome Length
5229802 bp
Protein-coding Genes
4841 genes
Non-Coding Genes
312 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | E0E06_14045 | Not Available | Positive | 2930922 - 2931281 | 13390.0 |
| nickel-responsive transcriptional regulator nikr | E0E06_14050 | Not Available | Negative | 2931401 - 2931802 | 15094.7 |
| nickel import atp-binding protein nike | E0E06_14055 | Not Available | Negative | 2931808 - 2932614 | 29695.5 |
| nickel import atp-binding protein nikd | E0E06_14060 | Not Available | Negative | 2932611 - 2933375 | 26812.2 |
| nickel abc transporter permease subunit nikc | E0E06_14065 | Not Available | Negative | 2933375 - 2934208 | 30363.8 |
| nickel abc transporter permease subunit nikb | E0E06_14070 | Not Available | Negative | 2934205 - 2935149 | 35231.2 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | E0E06_14075 | Not Available | Negative | 2935149 - 2936723 | 58761.3 |
| 4'-phosphopantetheinyl transferase acpt | E0E06_14080 | Not Available | Negative | 2936834 - 2937421 | 21724.8 |
| ai-2e family transporter | E0E06_14085 | Not Available | Negative | 2937476 - 2938525 | 38538.8 |
| mfs transporter | E0E06_14090 | Not Available | Positive | 2938624 - 2939874 | 43430.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





