Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | HW43_RS02285 | Not Available | Negative | 480909 - 482540 | 60611.4 |
| 4fe-4s mono-cluster protein yjdi | HW43_RS02290 | Not Available | Positive | 482721 - 482951 | 8650.47 |
| gnat family n-acetyltransferase | HW43_RS02295 | Not Available | Positive | 482963 - 483235 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | HW43_RS02305 | Not Available | Positive | 483462 - 483758 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | HW43_RS02310 | Not Available | Positive | 483786 - 483959 | 6555.44 |
| lysine--trna ligase | HW43_RS02315 | Not Available | Negative | 484078 - 485595 | 57828.9 |
| dipeptide/tripeptide permease dtpc | HW43_RS02320 | Not Available | Negative | 485832 - 487289 | 53043.7 |
| lysine decarboxylase cada | HW43_RS02325 | Not Available | Negative | 487348 - 489495 | 81264.7 |
| cadaverine/lysine antiporter | HW43_RS02330 | Not Available | Negative | 489575 - 490909 | 46667.8 |
| lysine decarboxylation/transport transcriptional activator cadc | HW43_RS02335 | Not Available | Negative | 491274 - 492812 | 57830.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





