Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme yjbq | HW43_RS01920 | Not Available | Positive | 402185 - 402601 | 15670.8 |
| mmcq/yjbr family dna-binding protein | HW43_RS01925 | Not Available | Positive | 402605 - 402961 | 13520.2 |
| excinuclease abc subunit uvra | HW43_RS01930 | Not Available | Negative | 402996 - 405818 | 103874.0 |
| single-stranded dna-binding protein ssb1 | HW43_RS01935 | Not Available | Positive | 406072 - 406608 | 18976.1 |
| yjcb family protein | HW43_RS01940 | Not Available | Negative | 406707 - 406988 | 10330.0 |
| c-di-gmp phosphodiesterase pdec | HW43_RS01945 | Not Available | Positive | 407418 - 409004 | 60820.8 |
| superoxide response transcriptional regulator soxs | HW43_RS01950 | Not Available | Negative | 409007 - 409330 | 12911.6 |
| redox-sensitive transcriptional activator soxr | HW43_RS01955 | Not Available | Positive | 409416 - 409880 | 17150.7 |
| guanine/hypoxanthine transporter ghxp | HW43_RS01960 | Not Available | Positive | 410426 - 411775 | 45714.4 |
| na+/h+ antiporter | HW43_RS01965 | Not Available | Positive | 411926 - 413575 | 60527.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





