Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3304 domain-containing protein | HW43_RS00560 | Not Available | Negative | 117154 - 117708 | 20589.7 |
| lps translocon maturation chaperone lptm | HW43_RS00565 | Not Available | Positive | 118058 - 118261 | 7177.59 |
| diaminopimelate epimerase | HW43_RS00570 | Not Available | Positive | 118298 - 119122 | 30210.4 |
| duf484 domain-containing protein | HW43_RS00575 | Not Available | Positive | 119119 - 119826 | 26730.4 |
| tyrosine recombinase xerc | HW43_RS00580 | Not Available | Positive | 119823 - 120719 | 33869.7 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | HW43_RS00585 | Not Available | Positive | 120719 - 121435 | 27123.4 |
| dna helicase ii | HW43_RS00590 | Not Available | Positive | 121519 - 123681 | 81994.7 |
| phosphodiester glycosidase family protein | HW43_RS00595 | Not Available | Negative | 123828 - 124592 | 28055.2 |
| protein ysgd | HW43_RS28245 | Not Available | Positive | 124754 - 124810 | 2140.55 |
| magnesium/cobalt transporter cora | HW43_RS00605 | Not Available | Positive | 124962 - 125912 | 36591.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





