Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | HW43_RS00010 | Not Available | Positive | 752 - 1111 | 13790.0 |
| membrane protein insertion efficiency factor yidd | HW43_RS00015 | Not Available | Positive | 1075 - 1332 | 9381.61 |
| membrane protein insertase yidc | HW43_RS00020 | Not Available | Positive | 1335 - 2981 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | HW43_RS00025 | Not Available | Positive | 3087 - 4451 | 49247.8 |
| tryptophanase leader peptide | HW43_RS00030 | Not Available | Positive | 4694 - 4768 | 2894.56 |
| tryptophanase | HW43_RS00035 | Not Available | Positive | 4989 - 6404 | 52776.4 |
| low affinity tryptophan permease tnab | HW43_RS00040 | Not Available | Positive | 6495 - 7742 | 45227.3 |
| multidrug efflux mfs transporter mdtl | HW43_RS00045 | Not Available | Positive | 7875 - 9050 | 41492.2 |
| hth-type transcriptional regulator yidz | HW43_RS00050 | Not Available | Positive | 9025 - 9984 | 36930.9 |
| 4'-phosphopantetheinyl transferase family protein | HW43_RS00055 | Not Available | Positive | 10141 - 10890 | 27682.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





