Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase ligb | HW43_RS23830 | Not Available | Negative | 4820075 - 4821757 | 63282.9 |
| guanylate kinase | HW43_RS23835 | Not Available | Positive | 4822015 - 4822638 | 23594.1 |
| dna-directed rna polymerase subunit omega | HW43_RS23840 | Not Available | Positive | 4822693 - 4822968 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | HW43_RS23845 | Not Available | Positive | 4822987 - 4825095 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | HW43_RS23850 | Not Available | Positive | 4825102 - 4825791 | 25344.6 |
| atp-dependent dna helicase recg | HW43_RS23855 | Not Available | Positive | 4825797 - 4827878 | 76480.2 |
| sodium/glutamate symporter | HW43_RS23860 | Not Available | Negative | 4828044 - 4829249 | 42445.9 |
| xanthine/proton symporter xanp | HW43_RS23865 | Not Available | Positive | 4829529 - 4830920 | 48871.2 |
| asma family protein | HW43_RS23870 | Not Available | Positive | 4831041 - 4832750 | 62202.8 |
| alpha-xylosidase | HW43_RS23875 | Not Available | Negative | 4832803 - 4835121 | 88056.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





