Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hok/gef family protein | HW43_RS16535 | Not Available | Positive | 3348807 - 3348947 | 5254.64 |
| Zinc ribbon domain-containing protein | HW43_RS16540 | Not Available | Positive | 3349209 - 3349541 | 11852.0 |
| Type vi secretion protein | HW43_RS26190 | Not Available | Positive | 3349546 - 3350439 | 33788.8 |
| Attr | Not Available | Not Available | Positive | 3350586 - 3350605 | Not Available |
| Flagella biosynthesis regulator flk | HW43_RS16550 | Not Available | Positive | 3350707 - 3351701 | 37025.1 |
| Mfs transporter | HW43_RS16555 | Not Available | Negative | 3351698 - 3352876 | 40467.7 |
| Beta-ketoacyl-acp synthase i | HW43_RS16560 | Not Available | Negative | 3353141 - 3354361 | 42615.9 |
| Bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | HW43_RS16565 | Not Available | Positive | 3354520 - 3356526 | 74546.3 |
| protein ysdd | HW43_RS27405 | Not Available | Positive | 285 - 365 | 3111.7 |
| 50s ribosomal protein l34 | HW43_RS00005 | Not Available | Positive | 595 - 735 | 5380.74 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





