Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yiaa | HW43_RS23385 | Not Available | Negative | 4723924 - 4724361 | 16139.6 |
| inner membrane protein yiab | HW43_RS23390 | Not Available | Negative | 4724407 - 4724748 | 12553.0 |
| xylulokinase | HW43_RS23395 | Not Available | Negative | 4724917 - 4726371 | 52681.4 |
| xylose isomerase | HW43_RS23400 | Not Available | Negative | 4726443 - 4727765 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | HW43_RS23405 | Not Available | Positive | 4728131 - 4729123 | 35722.1 |
| d-xylose abc transporter atp-binding protein | HW43_RS23410 | Not Available | Positive | 4729201 - 4730742 | 56459.9 |
| xylose abc transporter permease xylh | HW43_RS23415 | Not Available | Positive | 4730720 - 4731901 | 41033.5 |
| d-xylose utilization transcriptional activator xylr | HW43_RS23420 | Not Available | Positive | 4731979 - 4733157 | 44871.7 |
| protein bax | HW43_RS23425 | Not Available | Negative | 4733265 - 4734089 | 30869.3 |
| alpha-amylase | HW43_RS23430 | Not Available | Positive | 4734409 - 4736439 | 75710.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





