Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HW43_RS23080 | Not Available | Negative | 4650581 - 4650859 | 9815.82 |
| multidrug transporter subunit mdte | HW43_RS23085 | Not Available | Positive | 4650967 - 4652076 | 39309.4 |
| multidrug efflux pump rnd permease mdtf | HW43_RS23090 | Not Available | Positive | 4652101 - 4655214 | 111571.0 |
| acid resistance transcriptional activator gadw | HW43_RS23095 | Not Available | Negative | 4655577 - 4656305 | 28025.0 |
| acid resistance transcriptional activator gadx | HW43_RS23100 | Not Available | Negative | 4656673 - 4657497 | 31455.3 |
| glutamate decarboxylase | HW43_RS23105 | Not Available | Negative | 4657867 - 4659267 | 52688.0 |
| cytochrome c peroxidase | HW43_RS23110 | Not Available | Negative | 4659478 - 4660875 | 51471.2 |
| alpha,alpha-trehalase | HW43_RS23115 | Not Available | Positive | 4661280 - 4662929 | 63704.1 |
| helix-turn-helix transcriptional regulator | HW43_RS23120 | Not Available | Negative | 4662980 - 4663582 | 22605.6 |
| lysr family transcriptional regulator | HW43_RS23125 | Not Available | Positive | 4664102 - 4665001 | 33301.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





