Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ibsc | HW43_RS26295 | Not Available | Negative | 3965706 - 3965765 | 2179.02 |
| phosphoglycerate dehydrogenase | HW43_RS19545 | Not Available | Negative | 3965994 - 3967226 | 44178.4 |
| ribose-5-phosphate isomerase rpia | HW43_RS19550 | Not Available | Negative | 3967482 - 3968141 | 22861.8 |
| hypothetical protein | HW43_RS19555 | Not Available | Negative | 3968197 - 3968427 | 8362.51 |
| dna-binding transcriptional regulator argp | HW43_RS19560 | Not Available | Positive | 3968569 - 3969462 | 33473.6 |
| methylmalonyl-coa mutase | HW43_RS19565 | Not Available | Positive | 3969666 - 3971810 | 77780.5 |
| methylmalonyl co-a mutase-associated gtpase meab | HW43_RS19570 | Not Available | Positive | 3971803 - 3972798 | 36734.1 |
| methylmalonyl-coa decarboxylase | HW43_RS19575 | Not Available | Positive | 3972809 - 3973594 | 29174.3 |
| propionyl-coa:succinate coa transferase | HW43_RS19580 | Not Available | Positive | 3973618 - 3975096 | 53834.6 |
| lysr family transcriptional regulator srsr | HW43_RS19585 | Not Available | Negative | 3975093 - 3975989 | 34675.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





