Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | HW43_RS18895 | Not Available | Positive | 3825979 - 3827316 | 49603.7 |
| type vi secretion system protein tssl, short form | HW43_RS18900 | Not Available | Positive | 3827313 - 3827978 | 25274.7 |
| ompa family protein | HW43_RS18905 | Not Available | Positive | 3827991 - 3829643 | 60364.2 |
| hcp family type vi secretion system effector | HW43_RS18910 | Not Available | Positive | 3829701 - 3830192 | 18647.9 |
| type vi secretion system atpase tssh | HW43_RS18915 | Not Available | Positive | 3830383 - 3833028 | 98019.5 |
| gntr family transcriptional regulator | HW43_RS18920 | Not Available | Positive | 3833040 - 3834116 | 40561.8 |
| duf4123 domain-containing protein | HW43_RS18925 | Not Available | Positive | 3834317 - 3835138 | 31546.5 |
| duf3304 domain-containing protein | HW43_RS18930 | Not Available | Positive | 3835182 - 3835736 | 20736.0 |
| phospholipase effector tle1 domain-containing protein | HW43_RS18935 | Not Available | Positive | 3835777 - 3837726 | 74116.1 |
| hypothetical protein | HW43_RS18940 | Not Available | Positive | 3837735 - 3838271 | 20498.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





