Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | HW43_RS18845 | Not Available | Negative | 3818628 - 3818855 | 8174.67 |
| cysteine desulfurase csda | HW43_RS18850 | Not Available | Positive | 3819047 - 3820252 | 43277.7 |
| cysteine desulfurase sulfur acceptor subunit csde | HW43_RS18855 | Not Available | Positive | 3820252 - 3820695 | 15927.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | HW43_RS18860 | Not Available | Negative | 3820746 - 3821552 | 28563.6 |
| murein transglycosylase a | HW43_RS18865 | Not Available | Negative | 3821629 - 3822726 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 3822935 - 3823011 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3823045 - 3823121 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3823154 - 3823230 | Not Available |
| type vi secretion system contractile sheath small subunit | HW43_RS18885 | Not Available | Positive | 3823864 - 3824364 | 18656.3 |
| type vi secretion system contractile sheath large subunit | HW43_RS18890 | Not Available | Positive | 3824423 - 3825961 | 58020.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





