Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ypfm | HW43_RS27185 | Not Available | Negative | 3486898 - 3486957 | 2408.02 |
| arsc family reductase | HW43_RS17200 | Not Available | Positive | 3487338 - 3487694 | 13515.2 |
| succinyl-diaminopimelate desuccinylase | HW43_RS17205 | Not Available | Positive | 3487698 - 3488825 | 41287.4 |
| ypfn family protein | HW43_RS17210 | Not Available | Positive | 3488853 - 3489053 | 8071.78 |
| esterase | HW43_RS17215 | Not Available | Negative | 3489134 - 3489832 | 24801.4 |
| trna cytosine(34) acetyltransferase tmca | HW43_RS17220 | Not Available | Negative | 3489906 - 3491921 | 74792.5 |
| neutral zinc metallopeptidase | HW43_RS17225 | Not Available | Negative | 3491936 - 3492799 | 31489.1 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | HW43_RS17230 | Not Available | Negative | 3492946 - 3493344 | 14925.2 |
| toxin-antitoxin system antitoxin vapb | HW43_RS17235 | Not Available | Negative | 3493344 - 3493571 | 8499.05 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HW43_RS17240 | Not Available | Negative | 3493727 - 3494440 | 26996.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





