Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit alpha | HW43_RS15775 | Not Available | Negative | 3192829 - 3195315 | 93061.0 |
| chaperone napd | HW43_RS15780 | Not Available | Negative | 3195312 - 3195575 | 9469.03 |
| ferredoxin-type protein napf | HW43_RS15785 | Not Available | Negative | 3195565 - 3196059 | 18048.3 |
| protein yojo | HW43_RS28095 | Not Available | Positive | 3196168 - 3196332 | 6191.65 |
| serine protease inhibitor ecotin | HW43_RS15795 | Not Available | Positive | 3196446 - 3196955 | 19026.1 |
| malate dehydrogenase (quinone) | HW43_RS15800 | Not Available | Negative | 3197104 - 3198750 | 60248.1 |
| microcin j25 efflux abc transporter yoji | HW43_RS15805 | Not Available | Negative | 3198968 - 3200611 | 61572.4 |
| dna oxidative demethylase alkb | HW43_RS15810 | Not Available | Negative | 3200687 - 3201337 | 24069.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | HW43_RS15815 | Not Available | Negative | 3201337 - 3202401 | 39321.0 |
| fad:protein fmn transferase apbe | HW43_RS15820 | Not Available | Negative | 3202475 - 3203530 | 38609.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





