Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein fliq | HW43_RS14030 | Not Available | Positive | 2838443 - 2838712 | 9632.54 |
| flagellar biosynthetic protein flir | HW43_RS14035 | Not Available | Positive | 2838721 - 2839506 | 28521.3 |
| transcriptional regulator rcsa | HW43_RS14040 | Not Available | Positive | 2839796 - 2840419 | 23522.8 |
| protein dsrb | HW43_RS14045 | Not Available | Negative | 2840463 - 2840651 | 6946.22 |
| peroxide/acid resistance protein yodd | HW43_RS14050 | Not Available | Positive | 2840814 - 2841041 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | HW43_RS14055 | Not Available | Positive | 2841339 - 2842154 | 30457.9 |
| cellulose biosynthesis regulator diguanylate cyclase dgcq | HW43_RS14060 | Not Available | Negative | 2842151 - 2843845 | 64260.5 |
| yodc family protein | HW43_RS14065 | Not Available | Negative | 2844016 - 2844198 | 6688.89 |
| duf808 domain-containing protein | HW43_RS14070 | Not Available | Negative | 2844277 - 2845194 | 32134.7 |
| drug/metabolite exporter yeda | HW43_RS14075 | Not Available | Positive | 2845367 - 2846287 | 32196.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





