Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | HW43_RS10685 | Not Available | Positive | 2156161 - 2156781 | 23213.2 |
| 23s rrna pseudouridine(2605) synthase rlub | HW43_RS10690 | Not Available | Positive | 2156882 - 2157754 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HW43_RS10695 | Not Available | Negative | 2157794 - 2158384 | 22014.2 |
| ycik family oxidoreductase | HW43_RS10700 | Not Available | Negative | 2158381 - 2159139 | 27947.6 |
| protease sohb | HW43_RS10710 | Not Available | Positive | 2159359 - 2160408 | 39368.7 |
| ycin family protein | HW43_RS10715 | Not Available | Negative | 2160444 - 2160695 | 9386.17 |
| type i dna topoisomerase | HW43_RS10725 | Not Available | Positive | 2161075 - 2163672 | 97355.0 |
| hth-type transcriptional regulator cysb | HW43_RS10730 | Not Available | Positive | 2163882 - 2164856 | 36152.5 |
| ymia family putative membrane protein | HW43_RS10735 | Not Available | Positive | 2165175 - 2165315 | 5337.71 |
| protein ycix | HW43_RS10740 | Not Available | Positive | 2165318 - 2165485 | 6338.19 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





