Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1813678 - 1813765 | Not Available |
| hydrogenase 1 small subunit | HW43_RS08790 | Not Available | Positive | 1814192 - 1815310 | 40653.5 |
| ni/fe-hydrogenase large subunit | HW43_RS08795 | Not Available | Positive | 1815307 - 1817100 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | HW43_RS08800 | Not Available | Positive | 1817119 - 1817826 | 27598.8 |
| hydrogenase 1 maturation protease | HW43_RS08805 | Not Available | Positive | 1817823 - 1818410 | 21532.7 |
| hydrogenase-1 operon protein hyae | HW43_RS08810 | Not Available | Positive | 1818407 - 1818805 | 14890.6 |
| hydrogenase expression/formation protein | HW43_RS08815 | Not Available | Positive | 1818802 - 1819659 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | HW43_RS08820 | Not Available | Positive | 1819793 - 1821337 | 58054.3 |
| cytochrome d ubiquinol oxidase subunit ii | HW43_RS08825 | Not Available | Positive | 1821349 - 1822485 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | HW43_RS08830 | Not Available | Positive | 1822498 - 1822590 | 3597.68 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





