Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | HW43_RS07865 | Not Available | Negative | 1609616 - 1610611 | 36286.7 |
| dna-binding transcriptional regulator cecr | HW43_RS07870 | Not Available | Negative | 1610614 - 1611285 | 25018.1 |
| atp-dependent rna helicase rhle | HW43_RS07875 | Not Available | Positive | 1611514 - 1612878 | 49992.4 |
| n-glycosidase ybia | HW43_RS07880 | Not Available | Negative | 1613110 - 1613592 | 18670.3 |
| atp-dependent dna helicase ding | HW43_RS07885 | Not Available | Positive | 1613712 - 1615862 | 81474.9 |
| dna-binding protein ybib | HW43_RS07890 | Not Available | Positive | 1615890 - 1616852 | 35050.7 |
| hydroxycarboxylate dehydrogenase hcxb | HW43_RS07895 | Not Available | Positive | 1616993 - 1618078 | 38899.3 |
| protein ybie | HW43_RS28390 | Not Available | Positive | 1618145 - 1618204 | 2006.37 |
| duf1471 family protein ybij | HW43_RS07900 | Not Available | Negative | 1618307 - 1618567 | 8568.2 |
| c4-type zinc finger protein ybii | HW43_RS07905 | Not Available | Negative | 1618832 - 1619098 | 9756.33 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





