Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase holo-[acyl-carrier protein] synthase | HW43_RS06950 | Not Available | Negative | 1430352 - 1430903 | 20271.5 |
| citrate lyase subunit alpha | HW43_RS06955 | Not Available | Negative | 1430907 - 1432439 | 55194.0 |
| citrate (pro-3s)-lyase subunit beta | HW43_RS06960 | Not Available | Negative | 1432450 - 1433358 | 33141.6 |
| citrate lyase acyl carrier protein | HW43_RS06965 | Not Available | Negative | 1433355 - 1433651 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | HW43_RS06970 | Not Available | Negative | 1433666 - 1434724 | 40107.5 |
| sensor histidine kinase dpib | HW43_RS06975 | Not Available | Positive | 1435104 - 1436762 | 61659.7 |
| two-component response regulator dpia | HW43_RS06980 | Not Available | Positive | 1436731 - 1437411 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | HW43_RS06985 | Not Available | Negative | 1437452 - 1438837 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | HW43_RS06990 | Not Available | Positive | 1439426 - 1439986 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | HW43_RS06995 | Not Available | Positive | 1440161 - 1440370 | 7463.84 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





