Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 94-3024 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
41280 bp
Thymine Count
40305 bp
Guanine Count
37875 bp
Cytosine Count
41987 bp
Genome Length
161447 bp
Protein-coding Genes
168 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | HW43_RS04935 | Not Available | Negative | 1018795 - 1019262 | 17597.9 |
| dna polymerase iii subunit epsilon | HW43_RS04940 | Not Available | Positive | 1019327 - 1020058 | 27101.5 |
| Trna-asp | Not Available | Not Available | Positive | 1020191 - 1020267 | Not Available |
| aminopeptidase | HW43_RS04950 | Not Available | Positive | 1020594 - 1021379 | 29591.2 |
| protein ykfm | HW43_RS04955 | Not Available | Negative | 1021516 - 1021995 | 18146.9 |
| hypothetical protein | HW43_RS04960 | Not Available | Negative | 1022005 - 1022919 | 34023.4 |
| hcp family type vi secretion system effector | HW43_RS04965 | Not Available | Negative | 1022963 - 1023445 | 18000.5 |
| gntr family transcriptional regulator | HW43_RS04970 | Not Available | Negative | 1023372 - 1024821 | 54274.8 |
| gntr family transcriptional regulator | HW43_RS04975 | Not Available | Negative | 1024832 - 1026136 | 48753.2 |
| gntr family transcriptional regulator | HW43_RS27520 | Not Available | Positive | 1026304 - 1028519 | 81687.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





