Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 3234/A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1358891 bp
Thymine Count
1356827 bp
Guanine Count
1384145 bp
Cytosine Count
1383118 bp
Genome Length
5482981 bp
Protein-coding Genes
5025 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amidotransfease | EC3234A_186c00050 | Not Available | Positive | 4728654 - 4729421 | 28637.2 |
| l,d-transpeptidase-related protein | EC3234A_186c00060 | Not Available | Negative | 4729392 - 4730132 | 28022.8 |
| translation inhibitor toxin of toxin-antitoxin pair yafq/dinj | EC3234A_186c00070 | Not Available | Negative | 4730288 - 4730566 | 10847.2 |
| antitoxin of yafq-dinj toxin-antitoxin system | EC3234A_186c00080 | Not Available | Negative | 4730569 - 4730829 | 9406.33 |
| putative lipoprotein and c40 family peptidase | EC3234A_186c00090 | Not Available | Positive | 4731162 - 4731788 | 24399.0 |
| rep-associated tyrosine transposase | EC3234A_186c00100 | Not Available | Positive | 4731964 - 4732461 | 20042.8 |
| dna polymerase iv | EC3234A_186c00130 | Not Available | Positive | 4735225 - 4736280 | 39518.2 |
| antitoxin of the yafo-yafn toxin-antitoxin system | EC3234A_186c00140 | Not Available | Positive | 4736332 - 4736625 | 11234.4 |
| mrna interferase toxin of the yafo-yafn toxin-antitoxin system | EC3234A_186c00150 | Not Available | Positive | 4736628 - 4737026 | 15488.7 |
| putative acyl-coa transferase | EC3234A_186c00160 | Not Available | Positive | 4737114 - 4737488 | 14519.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





