Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 3234/A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1358891 bp
Thymine Count
1356827 bp
Guanine Count
1384145 bp
Cytosine Count
1383118 bp
Genome Length
5482981 bp
Protein-coding Genes
5025 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdhr dna-binding transcriptional dual regulator | EC3234A_2c00950 | Not Available | Positive | 161104 - 161868 | 29427.2 |
| pyruvate dehydrogenase, decarboxylase component e1, thiamine triphosphate-binding | EC3234A_2c00960 | Not Available | Positive | 162029 - 164692 | 99674.1 |
| pyruvate dehydrogenase, dihydrolipoyltransacetylase component e2 | EC3234A_2c00970 | Not Available | Positive | 164707 - 166599 | 66099.8 |
| lipoamide dehydrogenase | EC3234A_2c00980 | Not Available | Positive | 166924 - 168348 | 50691.4 |
| putative membrane protein | EC3234A_2c00990 | Not Available | Negative | 168419 - 170272 | 69365.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EC3234A_2c01000 | Not Available | Positive | 170627 - 173224 | 93503.4 |
| hypothetical protein | EC3234A_2c01010 | Not Available | Positive | 173400 - 173762 | 13942.3 |
| s-adenosylmethionine decarboxylase | EC3234A_2c01020 | Not Available | Negative | 173800 - 174594 | 30386.3 |
| spermidine synthase (putrescine aminopropyltransferase) | EC3234A_2c01030 | Not Available | Negative | 174610 - 175476 | 32323.2 |
| puls_outs family protein | EC3234A_2c01040 | Not Available | Negative | 175582 - 175929 | 12854.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





