Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | ARC77_RS28525 | Not Available | Positive | 14124 - 15401 | 48155.7 |
| type ii secretion system protein gspm | ARC77_RS28530 | Not Available | Positive | 15388 - 15900 | 19598.9 |
| a24 family peptidase | ARC77_RS28535 | Not Available | Positive | 16075 - 16791 | 26289.0 |
| gsps family t2ss pilot lipoprotein variant epto | ARC77_RS28540 | Not Available | Positive | 16883 - 17284 | 15052.4 |
| is3 family transposase | ARC77_RS28550 | Not Available | Positive | 17463 - 18634 | 45362.6 |
| is3 family transposase | ARC77_RS33240 | Not Available | Positive | 19175 - 19688 | 18142.6 |
| enterohemolysin ehxa | ARC77_RS28560 | Not Available | Positive | 19690 - 22686 | 106996.0 |
| enterohemolysin t1ss abc transporter permease/atpase ehxb | ARC77_RS28565 | Not Available | Positive | 22736 - 24856 | 79819.7 |
| enterohemolysin t1ss abc transporter subunit ehxd | ARC77_RS28570 | Not Available | Positive | 24860 - 26299 | 54526.8 |
| hypothetical protein | ARC77_RS33975 | Not Available | Positive | 26366 - 26560 | 7548.67 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





