Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | ARC77_RS27360 | Not Available | Negative | 5371733 - 5371915 | 6167.86 |
| class i sam-dependent methyltransferase | ARC77_RS27365 | Not Available | Negative | 5372413 - 5373081 | 24518.5 |
| duf1441 family protein | ARC77_RS33935 | Not Available | Positive | 5373231 - 5373386 | 5951.99 |
| is66-like element accessory protein tnpa | ARC77_RS27375 | Not Available | Positive | 5373462 - 5373842 | 14071.0 |
| is66 family insertion sequence element accessory protein tnpb | ARC77_RS27380 | Not Available | Positive | 5373839 - 5374186 | 12771.9 |
| is66-like element isec8 family transposase | ARC77_RS27385 | Not Available | Positive | 5374236 - 5375774 | 57772.2 |
| alpha/beta hydrolase | ARC77_RS27390 | Not Available | Negative | 5376077 - 5377561 | 55046.2 |
| omptin family outer membrane protease ompt | ARC77_RS27395 | Not Available | Negative | 5377748 - 5378701 | 35595.1 |
| helix-turn-helix domain-containing protein | ARC77_RS27400 | Not Available | Positive | 5379200 - 5379784 | 21416.7 |
| duf1441 family protein | ARC77_RS31070 | Not Available | Negative | 5379809 - 5379901 | 3580.28 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





