Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding autotransporter cah | ARC77_RS26080 | Not Available | Positive | 5163650 - 5166499 | 97393.6 |
| dynamin family protein | ARC77_RS26085 | Not Available | Positive | 5166610 - 5168994 | 89848.9 |
| diguanylate cyclase regulator rdcb family protein | ARC77_RS26090 | Not Available | Positive | 5168991 - 5169896 | 33899.9 |
| patatin-like phospholipase family protein | ARC77_RS26095 | Not Available | Positive | 5169893 - 5170963 | 38267.3 |
| duf932 domain-containing protein | ARC77_RS26105 | Not Available | Positive | 5171303 - 5172121 | 31274.5 |
| antirestriction protein | ARC77_RS26110 | Not Available | Positive | 5172213 - 5172698 | 18173.3 |
| radc family protein | ARC77_RS26115 | Not Available | Positive | 5172714 - 5173190 | 17772.5 |
| duf987 domain-containing protein | ARC77_RS26120 | Not Available | Positive | 5173259 - 5173480 | 8399.15 |
| type iv toxin-antitoxin system yeeu family antitoxin | ARC77_RS26130 | Not Available | Positive | 5173643 - 5174017 | 13752.3 |
| ta system toxin cbta family protein | ARC77_RS26135 | Not Available | Positive | 5174064 - 5174438 | 14118.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





