Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | ARC77_RS26030 | Not Available | Negative | 5149436 - 5150152 | 28513.9 |
| type i restriction endonuclease subunit r | ARC77_RS26035 | Not Available | Negative | 5150152 - 5153247 | 118378.0 |
| toxin-antitoxin system antitoxin dna adp-ribosyl glycohydrolase darg | ARC77_RS26040 | Not Available | Negative | 5153266 - 5154333 | 40675.0 |
| toxin-antitoxin system toxin dna adp-ribosyl transferase dart | ARC77_RS26045 | Not Available | Negative | 5154330 - 5154986 | 25234.9 |
| restriction endonuclease subunit s | ARC77_RS26050 | Not Available | Negative | 5154999 - 5156348 | 49453.2 |
| type i restriction-modification system subunit m | ARC77_RS26055 | Not Available | Negative | 5156348 - 5158786 | 91151.2 |
| hypothetical protein | ARC77_RS33455 | Not Available | Negative | 5158826 - 5159002 | 6738.01 |
| hypothetical protein | ARC77_RS26065 | Not Available | Positive | 5160015 - 5161394 | 53532.8 |
| hypothetical protein | ARC77_RS26070 | Not Available | Negative | 5161531 - 5162049 | 19425.6 |
| gtpase family protein | ARC77_RS26075 | Not Available | Positive | 5162405 - 5163277 | 32522.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





