Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1441 family protein | ARC77_RS34055 | Not Available | Negative | 5101336 - 5101461 | 4458.75 |
| type b 50s ribosomal protein l31 | ARC77_RS25775 | Not Available | Positive | 5101886 - 5102149 | 9916.74 |
| hok/gef family protein | ARC77_RS25780 | Not Available | Positive | 5102451 - 5102591 | 5271.78 |
| hypothetical protein | ARC77_RS25790 | Not Available | Negative | 5103463 - 5104134 | 26316.2 |
| duf1441 family protein | ARC77_RS25800 | Not Available | Negative | 5105667 - 5106418 | 26568.1 |
| is66-like element accessory protein tnpa | ARC77_RS25805 | Not Available | Positive | 5106472 - 5106897 | 15853.1 |
| is66 family insertion sequence element accessory protein tnpb | ARC77_RS25810 | Not Available | Positive | 5106894 - 5107244 | 13200.2 |
| is66-like element is682 family transposase | ARC77_RS25815 | Not Available | Positive | 5107275 - 5108888 | 61352.2 |
| duf1441 family protein | ARC77_RS25820 | Not Available | Negative | 5108919 - 5109749 | 31036.7 |
| is66 family insertion sequence element accessory protein tnpb | ARC77_RS25825 | Not Available | Negative | 5109792 - 5110172 | 14943.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





