Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ARC77_RS25720 | Not Available | Negative | 5095124 - 5095399 | 10006.7 |
| urease accessory protein ured | ARC77_RS25725 | Not Available | Positive | 5095780 - 5096478 | 25824.1 |
| urease subunit gamma | ARC77_RS25730 | Not Available | Positive | 5096569 - 5096871 | 11085.7 |
| urease subunit beta | ARC77_RS25735 | Not Available | Positive | 5096880 - 5097200 | 11762.1 |
| urease subunit alpha | ARC77_RS25740 | Not Available | Positive | 5097193 - 5098896 | 60498.2 |
| urease accessory protein uree | ARC77_RS25745 | Not Available | Positive | 5098906 - 5099370 | 17307.7 |
| urease accessory protein uref | ARC77_RS25750 | Not Available | Positive | 5099371 - 5100045 | 25156.9 |
| urease accessory protein ureg | ARC77_RS25755 | Not Available | Positive | 5100057 - 5100674 | 22125.6 |
| duf1441 family protein | ARC77_RS30850 | Not Available | Negative | 5100722 - 5100961 | 8836.35 |
| duf1441 family protein | ARC77_RS25765 | Not Available | Negative | 5101011 - 5101271 | 9669.65 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





