Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | ARC77_RS25400 | Not Available | Negative | 5021031 - 5024993 | 143822.0 |
| hypothetical protein | ARC77_RS25405 | Not Available | Positive | 5025048 - 5025257 | 7779.91 |
| sodium/proline symporter putp | ARC77_RS25410 | Not Available | Positive | 5025416 - 5026924 | 54333.3 |
| hypothetical protein | ARC77_RS25415 | Not Available | Negative | 5027073 - 5028416 | 50669.7 |
| iron uptake transporter permease efeu | ARC77_RS25425 | Not Available | Positive | 5029598 - 5030428 | 30345.7 |
| iron uptake system protein efeo | ARC77_RS25430 | Not Available | Positive | 5030486 - 5031613 | 41125.8 |
| iron uptake transporter deferrochelatase/peroxidase subunit | ARC77_RS25435 | Not Available | Positive | 5031619 - 5032890 | 46622.7 |
| phosphate starvation-inducible protein phoh | ARC77_RS25445 | Not Available | Positive | 5033510 - 5034298 | 29268.4 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | ARC77_RS25450 | Not Available | Negative | 5034348 - 5034761 | 16082.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | ARC77_RS25455 | Not Available | Negative | 5034763 - 5036088 | 50771.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





