Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | ARC77_RS25355 | Not Available | Negative | 5013464 - 5014060 | 20835.8 |
| general stress protein | ARC77_RS30815 | Not Available | Positive | 5014432 - 5014539 | 3631.03 |
| pyrimidine utilization transport protein g | ARC77_RS25360 | Not Available | Negative | 5014622 - 5015950 | 45570.4 |
| nadh-dependent fmn reductase rutf | ARC77_RS25365 | Not Available | Negative | 5015971 - 5016465 | 17761.3 |
| malonic semialdehyde reductase | ARC77_RS25370 | Not Available | Negative | 5016476 - 5017066 | 21566.5 |
| pyrimidine utilization protein d | ARC77_RS25375 | Not Available | Negative | 5017076 - 5017876 | 28950.8 |
| 3-aminoacrylate deaminase | ARC77_RS25380 | Not Available | Negative | 5017884 - 5018270 | 13751.5 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | ARC77_RS25385 | Not Available | Negative | 5018282 - 5018974 | 25288.1 |
| pyrimidine utilization protein a | ARC77_RS25390 | Not Available | Negative | 5018974 - 5020065 | 39945.4 |
| hth-type transcriptional regulator rutr | ARC77_RS25395 | Not Available | Positive | 5020353 - 5020991 | 23704.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





