Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonate abc transporter substrate-binding protein ssua | ARC77_RS24655 | Not Available | Negative | 4893097 - 4894056 | 34566.8 |
| nadph-dependent fmn reductase | ARC77_RS24660 | Not Available | Negative | 4894049 - 4894624 | 21233.4 |
| fimbrial protein | ARC77_RS24665 | Not Available | Positive | 4894980 - 4895519 | 18695.9 |
| molecular chaperone | ARC77_RS24670 | Not Available | Positive | 4895602 - 4896303 | 25420.9 |
| duf1441 family protein | ARC77_RS24675 | Not Available | Positive | 4896328 - 4898927 | 94603.5 |
| duf1441 family protein | ARC77_RS24680 | Not Available | Positive | 4898918 - 4899988 | 37782.6 |
| fimbrial protein | ARC77_RS24685 | Not Available | Positive | 4900016 - 4900543 | 18315.8 |
| fimbrial protein | ARC77_RS24690 | Not Available | Positive | 4900551 - 4901066 | 18383.8 |
| duf1441 family protein | ARC77_RS24695 | Not Available | Positive | 4901032 - 4901768 | 26777.2 |
| quinone-dependent dihydroorotate dehydrogenase | ARC77_RS24700 | Not Available | Positive | 4901879 - 4902889 | 36776.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





