Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1418 family protein | ARC77_RS24190 | Not Available | Positive | 4783847 - 4784134 | 10551.4 |
| nitroreductase nfsa | ARC77_RS24195 | Not Available | Positive | 4784118 - 4784840 | 26852.1 |
| 30s ribosomal protein s6--l-glutamate ligase | ARC77_RS24200 | Not Available | Positive | 4784901 - 4785803 | 32438.5 |
| ybjn domain-containing protein | ARC77_RS24205 | Not Available | Positive | 4785891 - 4786367 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | ARC77_RS24215 | Not Available | Positive | 4786718 - 4787830 | 40783.7 |
| putrescine abc transporter atp-binding subunit potg | ARC77_RS24220 | Not Available | Positive | 4787925 - 4789058 | 41981.4 |
| putrescine abc transporter permease poth | ARC77_RS24225 | Not Available | Positive | 4789068 - 4790021 | 35467.6 |
| putrescine abc transporter permease poti | ARC77_RS24230 | Not Available | Positive | 4790018 - 4790863 | 30475.3 |
| ybjo family protein | ARC77_RS24235 | Not Available | Positive | 4790923 - 4791411 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | ARC77_RS24240 | Not Available | Positive | 4791452 - 4792579 | 41962.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





