Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | ARC77_RS23880 | Not Available | Negative | 4717261 - 4718997 | 63163.3 |
| secretion protein hlyd | ARC77_RS23885 | Not Available | Negative | 4718990 - 4719985 | 36287.7 |
| dna-binding transcriptional regulator cecr | ARC77_RS23890 | Not Available | Negative | 4719988 - 4720659 | 25018.1 |
| atp-dependent rna helicase rhle | ARC77_RS23895 | Not Available | Positive | 4720888 - 4722255 | 50049.5 |
| type iii secretion system effector espx2 | ARC77_RS23905 | Not Available | Positive | 4722863 - 4724875 | 76850.2 |
| atp-dependent dna helicase ding | ARC77_RS23910 | Not Available | Positive | 4725159 - 4727309 | 81463.9 |
| dna-binding protein ybib | ARC77_RS23915 | Not Available | Positive | 4727337 - 4728299 | 35186.9 |
| hydroxycarboxylate dehydrogenase hcxb | ARC77_RS23920 | Not Available | Positive | 4728440 - 4729525 | 38886.3 |
| protein ybie | ARC77_RS33640 | Not Available | Positive | 4729592 - 4729651 | 2006.37 |
| duf1471 family protein ybij | ARC77_RS23925 | Not Available | Negative | 4729754 - 4730014 | 8538.17 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





