Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase membrane anchor subunit | ARC77_RS23205 | Not Available | Positive | 4599790 - 4600137 | 12824.3 |
| succinate dehydrogenase flavoprotein subunit | ARC77_RS23210 | Not Available | Positive | 4600137 - 4601903 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit sdhb | ARC77_RS23215 | Not Available | Positive | 4601919 - 4602635 | 26785.4 |
| 2-oxoglutarate dehydrogenase e1 component | ARC77_RS23225 | Not Available | Positive | 4602936 - 4605737 | 105068.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | ARC77_RS23230 | Not Available | Positive | 4605752 - 4606969 | 44014.0 |
| adp-forming succinate--coa ligase subunit beta | ARC77_RS23235 | Not Available | Positive | 4607063 - 4608229 | 41395.1 |
| succinate--coa ligase subunit alpha | ARC77_RS23240 | Not Available | Positive | 4608229 - 4609098 | 29779.3 |
| lysr substrate-binding domain-containing protein | ARC77_RS23245 | Not Available | Positive | 4609765 - 4610670 | 34393.5 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | ARC77_RS23250 | Not Available | Negative | 4610704 - 4611306 | 22373.7 |
| class i fumarate hydratase | ARC77_RS23255 | Not Available | Negative | 4611316 - 4612968 | 60130.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





