Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit f | ARC77_RS22650 | Not Available | Positive | 4488697 - 4490262 | 56180.4 |
| universal stress protein uspg | ARC77_RS22655 | Not Available | Negative | 4490383 - 4490811 | 15937.1 |
| zinc-dependent alcohol dehydrogenase | ARC77_RS22660 | Not Available | Positive | 4491032 - 4492270 | 44225.2 |
| small membrane protein ylda | ARC77_RS34150 | Not Available | Negative | 4492274 - 4492363 | 3258.21 |
| nucleoside diphosphate kinase regulator | ARC77_RS22670 | Not Available | Negative | 4492501 - 4492911 | 14928.0 |
| ribonuclease i | ARC77_RS22675 | Not Available | Negative | 4493141 - 4493947 | 29591.0 |
| citrate/succinate antiporter citt | ARC77_RS22680 | Not Available | Negative | 4494061 - 4495524 | 53095.7 |
| triphosphoribosyl-dephospho-coa synthase citg | ARC77_RS22685 | Not Available | Negative | 4495575 - 4496453 | 31702.5 |
| citrate lyase holo-[acyl-carrier protein] synthase | ARC77_RS22690 | Not Available | Negative | 4496428 - 4496979 | 20271.5 |
| citrate lyase subunit alpha | ARC77_RS22695 | Not Available | Negative | 4496983 - 4498515 | 55163.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





