Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4434 family protein | ARC77_RS22395 | Not Available | Negative | 4425838 - 4426728 | 33080.6 |
| bacteriophage adsorption protein nfra | ARC77_RS22400 | Not Available | Negative | 4426729 - 4429701 | 111408.0 |
| cyclic di-3',5'-guanylate-activated glycosyltransferase nrfb | ARC77_RS22405 | Not Available | Negative | 4429688 - 4431925 | 85324.3 |
| isas1 family transposase | ARC77_RS22410 | Not Available | Negative | 4432191 - 4433327 | 43205.0 |
| hypothetical protein | ARC77_RS22415 | Not Available | Negative | 4433542 - 4433751 | 7953.64 |
| zincin-like metallopeptidase toxin domain-containing protein | ARC77_RS22420 | Not Available | Negative | 4433790 - 4435124 | 50617.3 |
| hypothetical protein | ARC77_RS22425 | Not Available | Negative | 4435293 - 4435700 | 15881.3 |
| rhs repeat-associated core domain-containing protein | ARC77_RS22430 | Not Available | Negative | 4435718 - 4440568 | 179189.0 |
| dcrb-related protein | ARC77_RS22435 | Not Available | Negative | 4440588 - 4441049 | 17321.3 |
| type vi secretion system tip protein vgrg | ARC77_RS22440 | Not Available | Negative | 4441077 - 4442978 | 71456.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





