Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| higa family addiction module antitoxin | ARC77_RS22095 | Not Available | Positive | 4341844 - 4342185 | 13171.8 |
| copper-exporting p-type atpase copa | ARC77_RS22100 | Not Available | Negative | 4342400 - 4344904 | 88010.5 |
| glutaminase a | ARC77_RS22105 | Not Available | Positive | 4345166 - 4346098 | 32846.1 |
| apc family permease | ARC77_RS22110 | Not Available | Positive | 4346101 - 4347393 | 45645.5 |
| tolc family outer membrane protein | ARC77_RS22115 | Not Available | Positive | 4347731 - 4349086 | 49196.8 |
| bapa-related adhesin siiea | ARC77_RS22120 | Not Available | Positive | 4349189 - 4353574 | 145674.0 |
| ig-like domain-containing protein | ARC77_RS22125 | Not Available | Positive | 4353626 - 4369348 | 521173.0 |
| type i secretion system permease/atpase | ARC77_RS22130 | Not Available | Positive | 4369352 - 4371514 | 80632.6 |
| hlyd family type i secretion periplasmic adaptor subunit | ARC77_RS22135 | Not Available | Positive | 4371511 - 4372686 | 43631.4 |
| cu(i)-responsive transcriptional regulator | ARC77_RS22140 | Not Available | Positive | 4372683 - 4373090 | 15235.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





