Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | ARC77_RS21740 | Not Available | Positive | 4265547 - 4266650 | 40366.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | ARC77_RS21745 | Not Available | Positive | 4266739 - 4267209 | 16157.4 |
| transcription antitermination factor nusb | ARC77_RS21750 | Not Available | Positive | 4267229 - 4267648 | 15689.9 |
| thiamine-phosphate kinase | ARC77_RS21755 | Not Available | Positive | 4267726 - 4268703 | 35042.8 |
| phosphatidylglycerophosphatase a | ARC77_RS21760 | Not Available | Positive | 4268681 - 4269196 | 19332.2 |
| t3ss effector pentapeptide repeat protein espy3 | ARC77_RS21765 | Not Available | Negative | 4269374 - 4270945 | 60955.1 |
| 1-deoxyxylulose-5-phosphate synthase yajo | ARC77_RS21770 | Not Available | Negative | 4271176 - 4272150 | 36438.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ARC77_RS21775 | Not Available | Negative | 4272205 - 4274067 | 67636.9 |
| (2e,6e)-farnesyl diphosphate synthase | ARC77_RS21780 | Not Available | Negative | 4274092 - 4274991 | 32133.4 |
| exodeoxyribonuclease vii small subunit | ARC77_RS21785 | Not Available | Negative | 4274991 - 4275233 | 8952.42 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





