Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface-exposed outer membrane lipoprotein yaiw | ARC77_RS21525 | Not Available | Positive | 4225487 - 4226581 | 40419.5 |
| yaiy family protein | ARC77_RS21530 | Not Available | Negative | 4226640 - 4226948 | 11425.2 |
| duf2754 domain-containing protein | ARC77_RS32960 | Not Available | Positive | 4227208 - 4227420 | 8097.92 |
| d-alanine--d-alanine ligase | ARC77_RS21545 | Not Available | Negative | 4227444 - 4228538 | 39318.0 |
| hypothetical protein | ARC77_RS33430 | Not Available | Positive | 4228616 - 4228819 | 8034.13 |
| anti-adapter protein irap | ARC77_RS21555 | Not Available | Positive | 4229001 - 4229261 | 9938.05 |
| alkaline phosphatase | ARC77_RS21560 | Not Available | Positive | 4229362 - 4230777 | 49441.3 |
| phosphate starvation-inducible protein psif | ARC77_RS21565 | Not Available | Positive | 4230896 - 4231216 | 11687.2 |
| diguanylate cyclase adra | ARC77_RS21570 | Not Available | Positive | 4231318 - 4232433 | 41552.9 |
| pyrroline-5-carboxylate reductase | ARC77_RS21575 | Not Available | Negative | 4232450 - 4233259 | 28146.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





