Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent aldehyde reductase yahk | ARC77_RS21275 | Not Available | Positive | 4167430 - 4168479 | 37970.6 |
| protein yahl | ARC77_RS21280 | Not Available | Positive | 4168722 - 4169537 | 31657.3 |
| Trna-pseudo | Not Available | Not Available | Positive | 4169883 - 4169963 | Not Available |
| hypothetical protein | ARC77_RS32955 | Not Available | Positive | 4169989 - 4170198 | 7519.31 |
| lyse family transporter | ARC77_RS21290 | Not Available | Negative | 4170215 - 4170886 | 24839.9 |
| duf1471 family periplasmic protein yaho | ARC77_RS21295 | Not Available | Positive | 4171033 - 4171308 | 9930.92 |
| propionate catabolism operon regulatory protein prpr | ARC77_RS21300 | Not Available | Negative | 4171406 - 4172992 | 58632.9 |
| methylisocitrate lyase | ARC77_RS21305 | Not Available | Positive | 4173231 - 4174121 | 32146.5 |
| 2-methylcitrate synthase | ARC77_RS21310 | Not Available | Positive | 4174277 - 4175446 | 43109.6 |
| 2-methylcitrate dehydratase | ARC77_RS21315 | Not Available | Positive | 4175480 - 4176931 | 53954.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





